BED	BED
bedCall	bedCall
bedImport	bedImport
BEIDList	BEIDList
BEIDs	BEIDs
beidsServer	beidsServer
beIDsToAllScopes	beIDsToAllScopes
beidsUI	beidsServer
cacheBedCall	cacheBedCall
cacheBedResult	cacheBedResult
checkBedCache	checkBedCache
checkBedConn	checkBedConn
checkBeIds	checkBeIds
cleanDubiousXRef	cleanDubiousXRef
clearBedCache	clearBedCache
compareBedInstances	compareBedInstances
connectToBed	connectToBed
convBeIdLists	convBeIdLists
convBeIds	convBeIds
convDfBeIds	convDfBeIds
dumpEnsCore	dumpEnsCore
dumpNcbiDb	dumpNcbiDb
dumpNcbiTax	dumpNcbiTax
dumpUniprotDb	dumpUniprotDb
exploreBe	exploreBe
exploreConvPath	exploreConvPath
filterByBEID	filterByBEID
findBe	findBe
findBeids	findBeids
firstCommonUpstreamBe	firstCommonUpstreamBe
focusOnScope	focusOnScope
focusOnScope.BEIDList	focusOnScope.BEIDList
forgetBedConnection	forgetBedConnection
genBePath	genBePath
geneIDsToAllScopes	geneIDsToAllScopes
genProbePath	genProbePath
getAllBeIdSources	getAllBeIdSources
getBeIdConvTable	getBeIdConvTable
getBeIdDescription	getBeIdDescription
getBeIdNames	getBeIdNames
getBeIdNameTable	getBeIdNameTable
getBeIds	getBeIds
getBeIdSymbols	getBeIdSymbols
getBeIdSymbolTable	getBeIdSymbolTable
getBeIdURL	getBeIdURL
getDirectOrigin	getDirectOrigin
getDirectProduct	getDirectProduct
getEnsemblGeneIds	getEnsemblGeneIds
getEnsemblPeptideIds	getEnsemblPeptideIds
getEnsemblTranscriptIds	getEnsemblTranscriptIds
getGeneDescription	getGeneDescription
getHomTable	getHomTable
getNcbiGeneTransPep	getNcbiGeneTransPep
getOrgNames	getOrgNames
getRelevantIds	getRelevantIds
getTargetedBe	getTargetedBe
getTaxId	getTaxId
getUniprot	getUniprot
guessIdOrigin	guessIdScope
guessIdScope	guessIdScope
identicalScopes	identicalScopes
is.BEIDList	is.BEIDList
largestBeSource	largestBeSource
listBe	listBe
listBeIdSources	listBeIdSources
listDBAttributes	listDBAttributes
listOrganisms	listOrganisms
listPlatforms	listPlatforms
loadBE	loadBE
loadBeAttribute	loadBeAttribute
loadBedModel	loadBedModel
loadBedOtherIndexes	loadBedOtherIndexes
loadBedResult	loadBedResult
loadBENames	loadBENames
loadBESymbols	loadBESymbols
loadBEVersion	loadBEVersion
loadCodesFor	loadCodesFor
loadCorrespondsTo	loadCorrespondsTo
loadHistory	loadHistory
loadIsAssociatedTo	loadIsAssociatedTo
loadIsExpressedAs	loadIsExpressedAs
loadIsHomologOf	loadIsHomologOf
loadIsTranslatedIn	loadIsTranslatedIn
loadLuceneIndexes	loadLuceneIndexes
loadNCBIEntrezGOFunctions	loadNCBIEntrezGOFunctions
loadNcbiTax	loadNcbiTax
loadOrganisms	loadOrganisms
loadPlf	loadPlf
loadProbes	loadProbes
lsBedCache	lsBedCache
lsBedConnections	lsBedConnections
metadata	metadata
metadata<-	metadata-set
registerBEDB	registerBEDB
scope	scope
scopes	scopes
searchBeid	searchBeid
searchId	searchId
setBedVersion	setBedVersion
showBedDataModel	showBedDataModel
