# Statistical Analysis and Data Display: Heiberger and Holland

## Documentation for package ‘HH’ version 3.1-52

- DESCRIPTION file.
- Code demos. Use demo() to run them.
- Package NEWS.

## Help Pages

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z misc

HH-package | Statistical Analysis and Data Display: Heiberger and Holland

## -- A --

abc | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
abrasion | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
acacia | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
acf.pacf.plot | Coordinated time series and ACF and PCF plots.
acfplot | Times series diagnostic plots for a structured set of ARIMA models.
AE.dotplot | AE (Adverse Events) dotplot of incidence and relative risk
ae.dotplot | AE (Adverse Events) dotplot of incidence and relative risk
ae.dotplot.long | AE (Adverse Events) dotplot of incidence and relative risk
aeanonym | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
AEdata | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
AEdotplot | AE (Adverse Events) dotplot of incidence and relative risk
AEdotplot.AElogrelrisk | AE (Adverse Events) dotplot of incidence and relative risk, support functions
AEdotplot.AEtable | AE (Adverse Events) dotplot of incidence and relative risk, support functions
AEdotplot.data.frame | AE (Adverse Events) dotplot of incidence and relative risk, support functions
AEdotplot.formula | AE (Adverse Events) dotplot of incidence and relative risk
AElogrelrisk | AE (Adverse Events) dotplot of incidence and relative risk, support functions
AEmatchSortorder | AE (Adverse Events) dotplot of incidence and relative risk, support functions
aeReshapeToLong | AE (Adverse Events) dotplot of incidence and relative risk
aicsigplot | Times series diagnostic plots for a structured set of ARIMA models.
analysis of covariance | Compute and plot oneway analysis of covariance
ancova | Compute and plot oneway analysis of covariance
ancova-class | Class "ancova" Analysis of Covariance
ancovaplot | Analysis of Covariance Plots
ancovaplot.formula | Analysis of Covariance Plots
animal | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
anneal | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
anova.ancova | Compute and plot oneway analysis of covariance
anova.ancovaplot | ANOVA table for a c("ancovaplot","trellis") object.
anovaMean | ANOVA table from the group sample sizes, means, and standard deviations.
antilogit | Logistic and odds functions and their inverses.
antiodds | Logistic and odds functions and their inverses.
aov.ancovaplot | ANOVA table for a c("ancovaplot","trellis") object.
aovStatement | ANOVA table for a c("ancovaplot","trellis") object.
aovStatement.ancovaplot | ANOVA table for a c("ancovaplot","trellis") object.
aovStatementAndAnova | ANOVA table for a c("ancovaplot","trellis") object.
aovStatementAndAnova.ancovaplot | ANOVA table for a c("ancovaplot","trellis") object.
aovSufficient | Analysis of variance from sufficient statistics for groups.
aperm.trellis | Extend matrix reshaping functions to trellis objects.
apple | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
ara | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
arima.diag.hh | Repair design error in S-Plus arima.diag
arima.model | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
arma.loop | Loop through a series of ARIMA models and display coordinated tables and diagnoastic graphs.
as.character.arima.model | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
as.data.frame.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
as.glht | Support functions in R for MMC (mean-mean multiple comparisons) plots.
as.glht.multicomp | Support functions in R for MMC (mean-mean multiple comparisons) plots.
as.likert | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.array | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.data.frame | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.default | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.formula | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.ftable | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.listOfNamedMatrices | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.matrix | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likert.table | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
as.likertDataFrame | Convert a list of numeric matrices to a single matrix
as.likertDataFrame.array | Convert a list of numeric matrices to a single matrix
as.likertDataFrame.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
as.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
as.listOfNamedMatrices.array | Convert a list of numeric matrices to a single matrix
as.listOfNamedMatrices.list | Convert a list of numeric matrices to a single matrix
as.listOfNamedMatrices.MatrixList | Convert a list of numeric matrices to a single matrix
as.matrix.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
as.matrix.trellis | Convert a one-dimensional trellis object to a two-dimensional trellis object. This permits combineLimits and useOuterStrips to work.
as.MatrixList | Convert a list of numeric matrices to a single matrix
as.MatrixList.array | Convert a list of numeric matrices to a single matrix
as.multicomp | Support functions in R for MMC (mean-mean multiple comparisons) plots.
as.multicomp.glht | Support functions in R for MMC (mean-mean multiple comparisons) plots.
as.numeric.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
as.position | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
as.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
as.pyramidLikert | Print a Likert plot as a Population Triangle
as.rts | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
as.TwoTrellisColumns5 | Print two conformable trellis plots in adjacent columns with user control of widths.
as.vector.trellis | Convert a two-dimensional trellis object into a one-dimensional trellis object. Change the order of panels in a trellis object.
AudiencePercent | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
axis.i2wt | specialized axis function for interaction2wt.
axis.RightAdjustRight | Right-justify right-axis tick labels.

## -- B --

balance | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
barleyp | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
batch | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
bean | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
beta curve | Construct a power graph based on the NTplot.
birthweight | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
bivariateNormal | Plot the bivariate normal density using wireframe for specified rho.
blood | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
blyth | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
breast | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
brewer.pal.likert | Selection of colors for Likert plots.
budworm | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
byss | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- C --

c.AEdotplot | AE (Adverse Events) dotplot of incidence and relative risk, support functions
c3c4 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
case | case statistics for regression analysis
case.lm | case statistics for regression analysis
catalystm | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
cbind.trellis | Extend matrix reshaping functions to trellis objects.
cc135 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
cc176 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
cement | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
census4 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
cereals | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
chimp | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
chisq.curve | plot a chisquare or a F-curve.
chisq.observed | plot a chisquare or a F-curve.
chisq.setup | plot a chisquare or a F-curve.
ci.plot | Plot confidence and prediction intervals for simple linear regression
ci.plot.lm | Plot confidence and prediction intervals for simple linear regression
CIplot | Illustration of the meaning of confidence levels.
circuit | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
co2 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
coef.ancova | Compute and plot oneway analysis of covariance
coefArimaHH | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
col.hh | Initializing Trellis Displays
col3x2 | col3x2 color dataset
ColorSet | Selection of colors for Likert plots.
colPcts | Row and columns percents
combineLimits.trellisvector | Combine limits on a one-dimensional trellis object.
concord | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
confinterval.matrix | Illustration of the meaning of confidence levels.
confintervaldata | Illustration of the meaning of confidence levels.
confintervalplot | Illustration of the meaning of confidence levels.
covariance | Compute and plot oneway analysis of covariance
cp.calc | Rearranges and improves the legibility of the output from the stepwise function in S-Plus.
cplx | Generate a sequence spanning the xlim of a lattice window.
crash | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
crime | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- D --

darwin | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
datasets | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
dchisq.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus.
ddiscunif | Discrete Uniform Distribution
Design_2.8_2 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
Design_2.8_2_full | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
df.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus.
diag.arma.loop | Loop through a series of ARIMA models and display coordinated tables and diagnoastic graphs.
diag.maybe.null | Returns a value for the diagonal of NA and NULL arguments.
diagplot5new | Transpose of ECDF for centered fitted values and residuals from a linear model.
diagQQ | QQ plot of regression residuals.
diamond | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
differential | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
Discrete4 | Discrete with four levels color dataset.
display | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
distress | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
do.formula.trellis.xysplom | Interprets model formulas for xysplom and extended bwplots
draft | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
draft70mn | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
drunk | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- E --

eggs | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
elnino | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
EmphasizeVerticalPanels | Helper function for likertWeighted(). used for vertical spacing and horizontal borders of grouped panels.
employM16 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
emptyMainLeftAxisLeftStripBottomLegend | Remove main title, left axis tick labels, left strip, bottom legend from plot and keep the vertical spacing allocated to those items.
emptyRightAxis | Print two conformable trellis plots in adjacent columns with user control of widths.
energy | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
esr | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
export.eps | Exports a graph to an EPS file.

## -- F --

F.curve | plot a chisquare or a F-curve.
F.observed | plot a chisquare or a F-curve.
F.setup | plot a chisquare or a F-curve.
fabricwear | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
fat | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
fat.dat | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
feed | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
filmcoat | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
filter | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
floating | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
fruitflies | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
furnace | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- G --

girlht | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
glasses | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
glhtWithMCP.993 | Retain averaging behavior that was previously available in glht.
gof.calculation | Calculate Box-Ljung Goodness of Fit for ARIMA models in S-Plus.
gofplot | Times series diagnostic plots for a structured set of ARIMA models.
golf | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
grid.xaxis.hh | make x- and y-axis labels
grid.yaxis.hh | make x- and y-axis labels
GSremove | Remove selected GraphSheetPages in the S-Plus Windows GUI Graphsheet
gum | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
gunload | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- H --

har1 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
har2 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
har3 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
hardness | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
heartvalve | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
HH | Statistical Analysis and Data Display: Heiberger and Holland
HH.regsubsets | Display tabular results for Best Subsets Regression.
hhcapture | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex
hhcode | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex
hhdev.off | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex
hhlatex | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex
hhpdf | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex
hhpng | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex
HHscriptnames | Find absolute pathname of a script file for the HH book in the HH package.
hooppine | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
hospital | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
hotdog | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
houseprice | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
hov | Homogeneity of Variance
hov.bf | Homogeneity of Variance
hovBF | Homogeneity of Variance: Brown-Forsyth method
hovPlot | Homogeneity of Variance Plot
hovPlot.bf | Homogeneity of Variance Plot
hovplotBF | Homogeneity of Variance: Brown-Forsyth method
hpErie | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
htwt | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- I --

iceskate | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
icu | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
if.R | Conditional Execution for R or S-Plus
income | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
inconsistent | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
InsertVerticalPanels | Expand a 3D array on the second dimension, inserting empty layers where the input vector has a '0' value. A 2D argument 'x' with 'dim(x)==c(r,c)' is first extended to 3D with 'dim(x)==c(1,r,c)', and then the result is collapsed back to 2D.
interaction.positioned | interaction method for positioned factors.
interaction2wt | Plot all main effects and twoway interactions in a multifactor design
interaction2wt.default | Plot all main effects and twoway interactions in a multifactor design
interaction2wt.formula | Plot all main effects and twoway interactions in a multifactor design
interval | Prediction and Confidence Intervals for glm Objects
interval.glm | Prediction and Confidence Intervals for glm Objects
intubate | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
intxplot | Interaction plot, with an option to print standard error bars.
ironpot | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
is.likert | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
is.likertCapable | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
is.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
is.na.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
is.numeric.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
is.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
is.R | Conditional Execution for R or S-Plus

## -- J --

jury | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- K --

kangaroo | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
kidney | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
kyphosis | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- L --

ladder | Draw a "ladder of powers" plot, plotting each of several powers of y against the same powers of x.
ladder.f | Draw a "ladder of powers" plot, plotting each of several powers of y against the same powers of x.
ladder.fstar | Draw a "ladder of powers" plot, plotting each of several powers of y against the same powers of x.
ladder3 | Draw a "ladder of powers" plot, plotting each of several powers of y against the same powers of x.
lake | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
latex.array | Generate the latex code for an '"array"' or '"table"' with 3, 4, or more dimensions.
latex.matrix | Generate the latex code for an '"array"' or '"table"' with 3, 4, or more dimensions.
latex.table | Generate the latex code for an '"array"' or '"table"' with 3, 4, or more dimensions.
latticeresids | Subroutine used by residual.plots.lattice
leftLabels.trellis | Print two conformable trellis plots in adjacent columns with user control of widths.
legendGrob2wt | place separate keys to the left of each row of a trellis
leukemia | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
lft.asat | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
lifeins | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
likert | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
likertColor | Selection of colors for Likert plots.
likertColorBrewer | Selection of colors for Likert plots.
likertMosaic | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
likertMosaic.array | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
likertMosaic.data.frame | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
likertMosaic.default | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
likertMosaic.formula | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
likertMosaic.list | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
likertMosaic.matrix | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style.
LikertPercentCountColumns | Display likert plots with percents in the first column of panels and counts in the second column of panels.
likertplot | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
likertWeighted | Special case wrapper for likert() when multiple columns are to have the same bar thicknesses. Uses formula with one or two conditioning variables.
likertWeighted.array | Special case wrapper for likert() when multiple columns are to have the same bar thicknesses. Uses formula with one or two conditioning variables.
likertWeighted.default | Special case wrapper for likert() when multiple columns are to have the same bar thicknesses. Uses formula with one or two conditioning variables.
likertWeighted.formula | Special case wrapper for likert() when multiple columns are to have the same bar thicknesses. Uses formula with one or two conditioning variables.
lm.regsubsets | Evaluate lm model with highest adjusted $R^2$.
lmatContrast | Find the row numbers in the lmat corresponding to the focus factor.
lmatPairwise | lmatPairwise
lmatPairwise.glht | lmatPairwise
lmatPairwise.matrix | lmatPairwise
lmatPairwise.mmc | lmatPairwise
lmatPairwise.mmc.multicomp | lmatPairwise
lmatRows | Find the row numbers in the lmat corresponding to the focus factor.
lmatRows.glht | Find the row numbers in the lmat corresponding to the focus factor.
lmatRows.lm | Find the row numbers in the lmat corresponding to the focus factor.
lmatRows.mmc.multicomp | Find the row numbers in the lmat corresponding to the focus factor.
lmatRows.multicomp | Find the row numbers in the lmat corresponding to the focus factor.
lmplot | Four types of residual plots for linear models.
logit | Logistic and odds functions and their inverses.
logrelrisk | AE (Adverse Events) dotplot of incidence and relative risk
longley | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
lymph | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- M --

mainSubLegend.trellis | Print two conformable trellis plots in adjacent columns with user control of widths.
maiz | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
make.xaxis.hh.labels | make x- and y-axis labels
make.yaxis.hh.labels | make x- and y-axis labels
manhours | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
market | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
matrix | Convert a list of numeric matrices to a single matrix
matrix.trellis | Convert a one-dimensional trellis object to a two-dimensional trellis object. This permits combineLimits and useOuterStrips to work.
mcalinfct | MCA multiple comparisons analysis (pairwise)
mcp2matrix.993 | Retain averaging behavior that was previously available in glht.
mice | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
mileage | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
MMC | MMC (Mean-mean Multiple Comparisons) plots.
mmc | MMC (Mean-mean Multiple Comparisons) plots.
mmc.default | MMC (Mean-mean Multiple Comparisons) plots.
mmc.glht | MMC (Mean-mean Multiple Comparisons) plots.
mmc.mean | MMC (Mean-mean Multiple Comparisons) plots from the sufficient statistics for a one-way design.
mmcAspect | Control aspect ratio in MMC plots to maintain isomeans grid as a square.
mmcboth | Functions used by mmcplot.
mmcisomeans | Functions used by mmcplot.
mmcmatch | Functions used by mmcplot.
mmcplot | MMC (Mean-mean Multiple Comparisons) plots in lattice.
mmcplot.default | MMC (Mean-mean Multiple Comparisons) plots in lattice.
mmcplot.glht | MMC (Mean-mean Multiple Comparisons) plots in lattice.
mmcplot.mmc | MMC (Mean-mean Multiple Comparisons) plots in lattice.
mmcplot.mmc.multicomp | MMC (Mean-mean Multiple Comparisons) plots in lattice.
mmcplot.multicomp | MMC (Mean-mean Multiple Comparisons) plots in lattice.
mmcPruneIsomeans | MMC plots in lattice-suppress isomeans grid lines for specified levels of the factor.
model.frame.ancova | Compute and plot oneway analysis of covariance
model.tables.ancovaplot | ANOVA table for a c("ancovaplot","trellis") object.
mortality | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
mpg | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
multicomp | MMC (Mean-mean Multiple Comparisons) plots.
multicomp.label.change | Update a multicomp object by ordering its contrasts.
multicomp.label.change.mmc.multicomp | Update a multicomp object by ordering its contrasts.
multicomp.label.change.multicomp | Update a multicomp object by ordering its contrasts.
multicomp.mean | MMC (Mean-mean Multiple Comparisons) plots from the sufficient statistics for a one-way design.
multicomp.mmc | MMC (Mean-mean Multiple Comparisons) plots.
multicomp.mmc.mean | MMC (Mean-mean Multiple Comparisons) plots from the sufficient statistics for a one-way design.
multicomp.order | Update a multicomp object by ordering its contrasts.
multicomp.reverse | Force all comparisons in a "multicomp" object to have the same sign.
muscle | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- N --

njgolf | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
norm.curve | plot a normal or a t-curve with both x and z axes.
norm.observed | plot a normal or a t-curve with both x and z axes.
norm.outline | plot a normal or a t-curve with both x and z axes.
norm.setup | plot a normal or a t-curve with both x and z axes.
normal.and.t.dist | plot a normal or a t-curve with both x and z axes.
NormalAndTplot | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals.
NormalAndTplot.default | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals.
NormalAndTplot.htest | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals.
NormalAndTPower | Construct a power graph based on the NTplot.
normalApproxBinomial | Plots to illustrate Normal Approximation to the Binomial-hypothesis tests or confidence intervals.
normtemp | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
notch | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
npar.arma | Count the number of parameters in an ARIMA model specification.
npar.rarma | Count the number of parameters in an ARIMA model specification.
npar.sarma | Count the number of parameters in an ARIMA model specification.
NTplot | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals, including normal approximation to the binomial.
NTplot.default | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals, including normal approximation to the binomial.
NTplot.htest | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals, including normal approximation to the binomial.
NTplot.NormalAndTplot | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals, including normal approximation to the binomial.
NTplot.power.htest | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals, including normal approximation to the binomial.
NZScienceTeaching | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- O --

oats | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
objip | loop through all attached directories looking for pattern, possibly restricting to specified class or mode.
odds | Logistic and odds functions and their inverses.
OddsRatio | Calculate or plot the odds ratio for a 2x2 table of counts.
odoffna | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
OneWayVarPlot | Displays a three-panel 'bwplot' of the data by group, of the group means, and of the entire dataset. This is an approximate visualization of the Mean Square lines from the ANOVA table for a one-way ANOVA model.
operating characteristic curve | Construct a power graph based on the NTplot.
operator | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
oral | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
orthog.complete | Construct an orthogonal matrix which is an arbitrary completion of the column space of the input set of columns.
orthog.construct | Construct an orthogonal matrix which is an arbitrary completion of the column space of the input set of columns.
ozone | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- P --

panel.acf | Panel functions for tsdiagplot.
panel.ae.dotplot | AE (Adverse Events) dotplot of incidence and relative risk
panel.ae.leftplot | AE (Adverse Events) dotplot of incidence and relative risk
panel.ae.rightplot | AE (Adverse Events) dotplot of incidence and relative risk
panel.ancova | Compute and plot oneway analysis of covariance
panel.ancova.superpose | Analysis of Covariance Plots
panel.axis.right | Right-justify right-axis tick labels.
panel.barchart2 | Panel functions for likert that include a stackWidth argument
panel.bwplot.groups | Panel function for bwplot that displays an entire box in the colors coded by groups.
panel.bwplot.intermediate.hh | Panel functions for bwplot.
panel.bwplot.superpose | Panel function for bwplot that displays an entire box in the colors coded by groups.
panel.bwplott | Extension to S-Plus trellis to allow transposed plots.
panel.cartesian | trellis panel function, with labeled rows and columns and without strip labels.
panel.case | case statistics for regression analysis
panel.ci.plot | Default Panel Function for ci.plot
panel.confintMMC | Confidence interval panel for MMC tiebreaker plots, or confidence interval plot.
panel.dotplot.tb | Dotplot with evenly spaced tiebreakers.
panel.gof | Panel functions for tsdiagplot.
panel.hov | Homogeneity of Variance Plot
panel.interaction2wt | Plot all main effects and twoway interactions in a multifactor design
panel.intxplot | Interaction plot, with an option to print standard error bars.
panel.isomeans | isomeans grid for MMC plots.
panel.likert | Panel functions for likert that include a stackWidth argument
panel.pairs.hh | Function based on S-Plus panel.pairs to add the subpanel.scales and panel.cex arguments.
panel.residSquare | Draw a plot of y vs x from a linear model object, with residuals indicated by lines or squares.
panel.std.resid | Panel functions for tsdiagplot.
panel.xysplom | panel method for xysplom.
panelOnly.trellis | Print two conformable trellis plots in adjacent columns with user control of widths.
paper | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
partial.corr | partial correlations
patient | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
pchisq.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus.
pdf.latex | Construct a pdf file from a "latex" file. See Hmisc::latex for concepts.
pdiscunif | Discrete Uniform Distribution
perspBack.wall.x | Helper functions for regr2.plot
perspBack.wall.y | Helper functions for regr2.plot
perspFloor | Helper functions for regr2.plot
perspPlane | Helper functions for regr2.plot
pf.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus.
plasma | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
plot.ancova | Compute and plot oneway analysis of covariance
plot.case | case statistics for regression analysis
plot.likert | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.array | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.data.frame | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.default | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.formula | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.ftable | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.likert | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.list | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.matrix | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.structable | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.likert.table | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
plot.mmc.multicomp | MMC (Mean-mean Multiple Comparisons) plot.
plot.multicomp | Multiple comparisons plot that gives independent user control over the appearance of the significant and not significant comparisons.
plot.multicomp.adjusted | Multiple comparisons plot that gives independent user control over the appearance of the significant and not significant comparisons.
plot.multicomp.hh | Multiple comparisons plot that gives independent user control over the appearance of the significant and not significant comparisons.
plot.summaryHH.regsubsets | Display tabular results for Best Subsets Regression.
plotMatchMMC | Multiple comparisons plot that gives independent user control over the appearance of the significant and not significant comparisons.
plotOddsRatio | Calculate or plot the odds ratio for a 2x2 table of counts.
plotOddsRatio.base | Calculate or plot the odds ratio for a 2x2 table of counts.
political | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
PoorChildren | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
pop.vp.hh | push and pop a grid viewport, turn clipping off, change scale.
position | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
position<- | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
positioned-class | Class "positioned", extends "ordered" to specify the position for graphing the levels of a factor.
potency | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
power curve | Construct a power graph based on the NTplot.
powerplot | Construct a power graph based on the NTplot.
powerplot.NormalAndTplot | Construct a power graph based on the NTplot.
pox | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
predict.ancova | Compute and plot oneway analysis of covariance
print.AEdotplot | AE (Adverse Events) dotplot of incidence and relative risk, support functions
print.ancova | Compute and plot oneway analysis of covariance
print.arma.loop | summary and print and subscript methods for tsdiagplot and related objects.
print.arma.loop.list | summary and print and subscript methods for tsdiagplot and related objects.
print.cp.object | Rearranges and improves the legibility of the output from the stepwise function in S-Plus.
print.latticeresids | Print a 'latticeresids' object.
print.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
print.MatrixList | Convert a list of numeric matrices to a single matrix
print.mmc.multicomp | Support functions in R for MMC (mean-mean multiple comparisons) plots.
print.multicomp | Support functions in R for MMC (mean-mean multiple comparisons) plots.
print.multicomp.hh | Support functions in R for MMC (mean-mean multiple comparisons) plots.
print.NormalAndTplot | Print method for Normal and t plots from NTplot.
print.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
print.pyramidLikert | Print a Likert plot as a Population Triangle
print.summaryHH.regsubsets | Display tabular results for Best Subsets Regression.
print.tsacfplots | summary and print and subscript methods for tsdiagplot and related objects.
print.tsdiagplot | Print a "tsdiagplot" object.
print.TwoTrellisColumns5 | Print two conformable trellis plots in adjacent columns with user control of widths.
print1.tsdiagplot | Print a "tsdiagplot" object.
print2.tsdiagplot | Print a "tsdiagplot" object.
product | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
ProfChal | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
ProfDiv | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
psycho | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
pulmonary | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
pulse | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
push.vp.hh | push and pop a grid viewport, turn clipping off, change scale.
pyramid | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
pyramidLikert | Print a Likert plot as a Population Triangle

## -- Q --

qchisq.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus.
qdiscunif | Discrete Uniform Distribution
qf.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus.

## -- R --

R282 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
R282.y | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
radioact | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
rbind.trellis | Extend matrix reshaping functions to trellis objects.
rdiscunif | Discrete Uniform Distribution
rearrange.diag.arma.loop | Loop through a series of ARIMA models and display coordinated tables and diagnoastic graphs.
regr1.plot | plot x and y, with optional straight line fit and display of squared residuals
regr2.plot | 3D plot of z against x and y, with regression plane fit and display of squared residuals.
regrresidplot | Draw a plot of y vs x from a linear model object, with residuals indicated by lines or squares.
rent | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
reorder.trellis | Convert a two-dimensional trellis object into a one-dimensional trellis object. Change the order of panels in a trellis object.
resid.squares | plot squared residuals in inches to match the y-dimension
residplot | Times series diagnostic plots for a structured set of ARIMA models.
residual.plots | Residual plots for a linear model.
residual.plots.lattice | Construct four sets of regression plots: Y against X, residuals against X, partial residuals against X, partial residuals against each X adjusted for all the other X columns.
residVSfitted | Draw plots of resid ~ y.hat and sqrt(abs(resid)) ~ y.hat
ResizeEtc | Display multiple independent trellis objects on the same coordinated scale.
ResizeEtc.likertPlot | Display multiple independent trellis objects, representing likert plots, on the same coordinated scale.
retard | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
rev.likert | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data.
rhiz.alfalfa | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
rhiz.clover | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
rhizobium1 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
rhizobium3 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
rightLabels.trellis | Print two conformable trellis plots in adjacent columns with user control of widths.
rowPcts | Row and columns percents

## -- S --

salary | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
salinity | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
salk | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
scaleLocation | Draw plots of resid ~ y.hat and sqrt(abs(resid)) ~ y.hat
seeding | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
selfexam | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
semantic | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
seqplot | Time series plot.
seqplot.default | Time series plot.
seqplot.ts | Time series plot.
seqplotForecast | seqplot with confidence bands for the forecast region.
SFF8121 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
shiny.CIplot | Illustration of the meaning of confidence levels.
shipment | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
sickle | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
skateslc | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
sliding | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
smokers | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
spacshu | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
spindle | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
sprint | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
stopdist | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
strip.background0 | Turn off the coloring in the trellis strip labels. Color 0 is the background color.
strip.interaction2wt | Plot all main effects and twoway interactions in a multifactor design
strip.ladder | Draw a "ladder of powers" plot, plotting each of several powers of y against the same powers of x.
strip.left.useOuterStrips | Functions based on strip.default for use with the useOuterScales function.
strip.left1 | Functions based on strip.default for use with the useOuterScales function.
strip.left2 | Functions based on strip.default for use with the useOuterScales function.
strip.top1 | Functions based on strip.default for use with the useOuterScales function.
strip.top2 | Functions based on strip.default for use with the useOuterScales function.
strip.useOuterStrips.first | Functions based on strip.default for use with the useOuterScales function.
strip.useOuterStrips.last | Functions based on strip.default for use with the useOuterScales function.
strip.xysplom | strip function that is able to place the correlation or regression coefficient into the strip label.
sufficient | Calculates the mean, standard deviation, and number of observations in each group of a data.frame that has one continuous variable and two factors.
summary.ancova | Compute and plot oneway analysis of covariance
summary.arma.loop | summary and print and subscript methods for tsdiagplot and related objects.
summary.arma.loop.list | summary and print and subscript methods for tsdiagplot and related objects.
summaryHH | Display tabular results for Best Subsets Regression.
summaryHH.regsubsets | Display tabular results for Best Subsets Regression.
surface | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- T --

tablet1 | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
teachers | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
testing | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
testscore | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
tires | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
title.grob | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
title.trellis | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
ToBW.likert | Change colors in a likert plot to shades of Black and White.
toCQxR | Reshape a 3-way array to a 2-way data.frame that can can be used with a trellis conditioning formula to get the three-way behavior. Used with likertWeighted().
tongue | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
transpose | Extend matrix reshaping functions to trellis objects.
transpose.default | Extend matrix reshaping functions to trellis objects.
transpose.trellis | Extend matrix reshaping functions to trellis objects.
tsacfplots | Coordinated time series and ACF and PCF plots.
tsdiagplot | Times series diagnostic plots for a structured set of ARIMA models.
tser.mystery.X | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
tser.mystery.Y | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
tser.mystery.Z | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
tsq | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
turkey | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
tv | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- U --

unique.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
unpositioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.
update.AEdotplot | AE (Adverse Events) dotplot of incidence and relative risk, support functions
usair | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
uscrime | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
useOuterScales | Put scales for axes only on the bottom and left panels of a lattice display, and give fine control over the placement of strips
useOuterStripsT2L1 | Three-factor generalization of latticeExtra::useOuterStrips

## -- V --

vcovSufficient | Analysis of variance from sufficient statistics for groups.
vif | Calculate the Variance Inflation Factor
vif.default | Calculate the Variance Inflation Factor
vif.formula | Calculate the Variance Inflation Factor
vif.lm | Calculate the Variance Inflation Factor
vocab | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
vulcan | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- W --

washday | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
water | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
weightloss | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
weld | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
wheat | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
WindowsPath | Find absolute pathname of a script file for the HH book in the HH package.
wool | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
workstation | Datasets for Statistical Analysis and Data Display, Heiberger and Holland

## -- X --

X.residuals | Residuals from the regression of each column of a data.frame against all the other columns.
X.residuals.default | Residuals from the regression of each column of a data.frame against all the other columns.
X.residuals.formula | Residuals from the regression of each column of a data.frame against all the other columns.
X.residuals.lm | Residuals from the regression of each column of a data.frame against all the other columns.
xscale.components.top.HH | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.
xysplom | scatterplot matrix with potentially different sets of variables on the rows and columns.
xysplom.default | scatterplot matrix with potentially different sets of variables on the rows and columns.
xysplom.formula | scatterplot matrix with potentially different sets of variables on the rows and columns.

## -- Y --

yates | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
yatesppl | Datasets for Statistical Analysis and Data Display, Heiberger and Holland
yscale.components.right.HH | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids.

## -- Z --

z.test | Z test for known population standard deviation

## -- misc --

.arima.info.names.not.ordered | Miscellaneous functions that I wish were in or consistent between S-Plus and R.
[.arma.loop | summary and print and subscript methods for tsdiagplot and related objects.
[.cp.object | Rearranges and improves the legibility of the output from the stepwise function in S-Plus.
[.diag.arma.loop | summary and print and subscript methods for tsdiagplot and related objects.
[.listOfNamedMatrices | Convert a list of numeric matrices to a single matrix
[.mmc.multicomp | MMC (Mean-mean Multiple Comparisons) plots.
[.positioned | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined.